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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932684.1_cds_XP_016479132.1_70701
CDS Infomation

[gene=LOC107800471] [db_xref=GeneID:107800471] [protein=putative lipase ROG1 isoform X4] [protein_id=XP_016479132.1] [location=join(63393..63532,64432..64499,65788..65858,65983..66225,67613..67773,67891..67946,68048..68100,68173..68293,68816..68913,70731..70763)] [gbkey=CDS]
Sequence

ATGGAGAACGGAGAAGTAGACAACAGAGGAGTTAGCTCGTCGGAAACCGTCAACGGCGGC
GAAGATGTATTTAGTTCTAAAGAATCCGATGCTTCCACCGCCGATCATCTTGTTATGATG
GTCCACGGTATTCTCGGAAGTGCCTCGGACTGGAAGTTTGGTGCTGAGCAGTTTGTTCGG
AATCTTCCTGACAAAGTTTTTGTTCATTGCAGTGAACGCAATATGGCTAAACTAACATTG
GATGGAGTGGATGTAATGGGCGAGCGGTTGGCTGAGGAGGTTCTTGAAGTGATCAAAAGA
AAGCCAGGTTTGAAGAAAATTTCTTTTGTTGCACATTCTGTTGGAGGAGTAGTGGCAAGA
TATGCAATTGGGAAATTATATAGACCTCCAAGAATGGAGAATGTGAAGAAGTTCTCAGCC
GATGCCAGTGAAGAAGGGTCAAAGGGCACAATAGCGGGCCTGGAACCAATAAATTTTATC
ACTGTCGCATCACCTCATCTGGGTTCAAGGGGTAACAAGCAGGTGCCATTTCTTTTTGGT
GTAACTGCCTTTGAGAAAGCTGCCGGTCTTGTTGTTCATTGGATATTCAAGAGAACTGGT
CGACACCTTTTTCTTAATGAAGATGAAGGAAAGACTCCATTACTGAGGCGGATGGTGGAA
GATGATGGTGAATTACACTTTATGTCTGCGTTGGGTTCATTCAAGCGAAGGGTCGCATAT
TCAAATGTTGGTTATGATCATATTGTAGGTTGGAGAACATCATCAATTAGACGTAATACT
GAACTGCCCAAGTGGGAGGACTCCTTAAATGAAAAGTATCCTCACATTGTGTATGAAGAA
CATTGCAAGGCGTGCGATAGTGAGCAGAGTGAATCTGTTGTAAAGGAAGATGATTGTTTT
GACAAGCTAGAAGAGGAATTGGTGACTGGTTTGTCTCGGGTGTCTTGGGAGAAAGTAGAT
GTCAGCTTTCACAGCAGCAGGCTCAGATTTGCTGCACATAGTGTTATTCAGTTTGGGACA
AAGAGGTGTTTGATTGGTGACTGA

Peptide Sequence

PEP ID

XP_016479132.1
PEP Infomation

PREDICTED: putative lipase ROG1 isoform X4 [Nicotiana tabacum]
Sequence

MENGEVDNRGVSSSETVNGGEDVFSSKESDASTADHLVMMVHGILGSASDWKFGAEQFVR
NLPDKVFVHCSERNMAKLTLDGVDVMGERLAEEVLEVIKRKPGLKKISFVAHSVGGVVAR
YAIGKLYRPPRMENVKKFSADASEEGSKGTIAGLEPINFITVASPHLGSRGNKQVPFLFG
VTAFEKAAGLVVHWIFKRTGRHLFLNEDEGKTPLLRRMVEDDGELHFMSALGSFKRRVAY
SNVGYDHIVGWRTSSIRRNTELPKWEDSLNEKYPHIVYEEHCKACDSEQSESVVKEDDCF
DKLEEELVTGLSRVSWEKVDVSFHSSRLRFAAHSVIQFGTKRCLIGD

Transcript Sequence

Gene sequence data has not been registered.